[ HELP ]
Paste gene IDs (max. 5000 gene IDs): OR upload a file containing a list of gene identifiers (max. 5000 gene IDs):
All 26473 genes in the oPOSSUM database OR a random set of genes from the oPOSSUM database OR paste gene IDs: OR upload a file containing a list of gene identifiers:
All profiles from the following tax groups: nematodes vertebrates insects with a minimum specificity of bits (min. 8 bits) OR select specific profiles:
All profiles with a minimum specificity of bits (min. 8 bits) OR select specific profiles:
Conservation cutoff: 0.40 0.60 Matrix score threshold: 75% 80% 85% OR enter score threshold % (min. = 80%) Amount of upstream / downstream sequence: 1500 / 1500 1000 / 1000 1000 / 500 500 / 500 250 / 250 250 / 0 OR enter custom values / bp (max. = 1500 / 1500) Number of results to return: Top 5 10 20 All results OR only results with Z-score >= 5 10 15 and Fisher score >= 5 7 9 (Default values have been chosen based on empirical studies) Sort results by: Z-score Fisher score
Press the Submit button to perform the analysis or Reset to reset the analysis parameters to their default values. Depending on parameters selected and server load, the analysis may take anywhere from a few seconds to several minutes to perform.