[ HELP ]
Paste gene IDs (max. 5000 gene IDs): OR upload a file containing a list of gene identifiers (max. 5000 gene IDs):
All 24752 genes in the oPOSSUM database OR a random set of genes from the oPOSSUM database OR paste gene IDs: OR upload a file containing a list of gene identifiers:
All vertebrate profiles with a minimum specificity of bits (min. 8 bits) OR select specific vertebrate profiles:
All profiles with a minimum specificity of bits (min. 8 bits) OR select specific profiles:
Conservation cutoff: 0.40 0.60 Matrix score threshold: 75% 80% 85% OR enter score threshold % (min. = 75%) Amount of upstream / downstream sequence: 10000 / 10000 10000 / 5000 5000 / 5000 5000 / 2000 2000 / 2000 2000 / 0 OR enter custom values / bp (max. = 10000 / 10000) Number of results to return: Top 5 10 20 All results OR only results with Z-score >= 5 10 15 and Fisher score >= 5 7 9 (Default values have been chosen based on empirical studies) Sort results by: Z-score Fisher score
Press the Submit button to perform the analysis or Reset to reset the analysis parameters to their default values. Depending on parameters selected and server load, the analysis may take anywhere from a few seconds to several minutes to perform.